BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E07SP1|AL430401
(945 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1118 1860 0.0
>3x_Contig1118
Length = 5540
Score = 1860 bits (937), Expect = 0.0
Identities = 942/945 (99%)
Strand = Plus / Minus
Query: 1 ttggcatagatttaaaccttcgaattgcacgccggtgggttttcctcgacttaccacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3263 ttggcatagatttaaaccttcgaattgcacgccggtgggttttcctcgacttaccacaca 3204
Query: 61 cacattcaaggcggcagaggggatattttgaacatattaacggggaacgattgtgagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3203 cacattcaaggcggcagaggggatattttgaacatattaacggggaacgattgtgagatc 3144
Query: 121 ttagctactacattagaggatatttgagaaaagcttgtacagcaatttattgaaattatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3143 ttagctactacattagaggatatttgagaaaagcttgtacagcaatttattgaaattatt 3084
Query: 181 gaatattgtgttacttcaaagatataggaaaactaaagctggtacttgattatwtcccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3083 gaatattgtgttacttcaaagatataggaaaactaaagctggtacttgattatttcccta 3024
Query: 241 gacgctggtaacccataagaaaaccgttcttatctcatcttgaattcctggccaaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3023 gacgctggtaacccataagaaaaccgttcttatctcatcttgaattcctggccaaagaaa 2964
Query: 301 ttcggtaagaaacttatttggttataattatathaaacatttgatcatacttgcaagtcc 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2963 ttcggtaagaaacttatttggttataattatattaaacatttgatcatacttgcaagtcc 2904
Query: 361 ttttcaatacccaacaccgagcgatatggaggcaccgcagagaataagtacaaggtcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2903 ttttcaatacccaacaccgagcgatatggaggcaccgcagagaataagtacaaggtcaca 2844
Query: 421 tcattcgatgcaaaataaaaattcaaagaacctttgtcttcgaataggtgattccccaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843 tcattcgatgcaaaataaaaattcaaagaacctttgtcttcgaataggtgattccccaac 2784
Query: 481 gaaaaacaaactaataatggtggattcaaaaccaaatgaaagcaatgatactttcgcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 gaaaaacaaactaataatggtggattcaaaaccaaatgaaagcaatgatactttcgcagt 2724
Query: 541 gccattgcgccaccagcttactaaacgtgtaagtgaagcacagatatacactttaccgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2723 gccattgcgccaccagcttactaaacgtgtaagtgaagcacagatatacactttaccgcc 2664
Query: 601 acagcttaaatctgccagatccacaccctctacaccacaattaccgtctggcagttcggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2663 acagcttaaatctgccagatccacaccctctacaccacaattaccgtctggcagttcggg 2604
Query: 661 ctttgattcagccgcttcaccctcatcgtctacgtcttcctcgcctttcaataaaccaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 ctttgattcagccgcttcaccctcatcgtctacgtcttcctcgcctttcaataaaccaac 2544
Query: 721 acttccaacaatcaacaccaaatttcacaataggccgagggccacgacaattgcgacaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543 acttccaacaatcaacaccaaatttcacaataggccgagggccacgacaattgcgacaag 2484
Query: 781 tgtacctcagatacagacgcccagtaatgattcaatggaaagcacgacacggtattgggt 840
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2483 tgtacttcagatacagacgcccagtaatgattcaatggaaagcacgacacggtattgggt 2424
Query: 841 tcttcaagaaaatacgcccatgtcctctacaaattatgataatgatatgaagagcatccc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2423 tcttcaagaaaatacgcccatgtcctctacaaattatgataatgatatgaagagcatccc 2364
Query: 901 atacaatacccattctgatgaagactcaccgagctattcagaatc 945
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 atacaatacccattctgatgaagactcaccgagctattcagaatc 2319
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6903
Number of Sequences: 1807
Number of extensions: 6903
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)